BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D08SP1|AL426516
(603 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig614 791 0.0
>3x_Contig614
Length = 2043
Score = 791 bits (396), Expect = 0.0
Identities = 400/404 (99%)
Strand = Plus / Plus
Query: 200 ccggcgataacgggtggcagttgcggagaacactgggtacaaaataactcaagaacattc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggcgataacgggtggcagttgcggagaacactgggtacaaaataactcaagaacattc 60
Query: 260 actgaaaaagcttaattgaccctgcgtccccttttttcttaacaactcagaaactgtagt 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgaaaaagcttaattgaccctgcgtccccttttttcttaacaactcagaaactgtagt 120
Query: 320 agccgtcttacaaactgtcactactcggcggctggttcgaaccccaaagtgctctctctt 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccgtcttacaaactgtcactactcggcggctggttcgaaccccaaagtgctctctctt 180
Query: 380 attctataattatraacagaaagaatagaaagagcccggctatagaggcgagaccgtatc 439
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attctataattataaacagaaagaatagaaagagcccggctatagaggcgagaccgtatc 240
Query: 440 aaaaccgtctggrtgtatcctagatcagtggcaaaaactggttttgttatcaaaactaat 499
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaccgtctggatgtatcctagatcagtggcaaaaactggttttgttatcaaaactaat 300
Query: 500 ggttggcgtgaattttcaagcattttattgacagtkttctcatgcgcacatgacccaaca 559
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ggttggcgtgaattttcaagcattttattgacagttttctcatgcgcacatgacccaaca 360
Query: 560 ttagtrattgaggtaccagctgtactgtgaccatatctatatat 603
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagtaattgaggtaccagctgtactgtgaccatatctatatat 404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2960
Number of Sequences: 1807
Number of extensions: 2960
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 603
length of database: 10,358,551
effective HSP length: 16
effective length of query: 587
effective length of database: 10,329,639
effective search space: 6063498093
effective search space used: 6063498093
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)